http://lagplon.ird.nc:8080/ipt/resource.do?r=lagplon_algues Claude Payri IRD Senior scientist

BP A5 NOUMEA 98848 NC

claude.payri@ird.fr http://coreus.ird.nc Sylvie Fiat IRD Engineer

BP A5 NOUMEA 98848 NC

sylvie.fiat@ird.fr http://coreus.ird.nc Claude Payri IRD Senior scientist

BP A5 NOUMEA 98848 NC

claude.payri@ird.fr http://coreus.ird.nc principalInvestigator Sylvie FIAT IRD IE

BP A5 NOUMEA 98848 NC

sylvie.fiat@ird.fr http://coreus.ird.nc metadataProvider Antoine N'YEURT USP

SUVA FJ

contentProvider Claude PAYRI IRD Phycologist

Noumea NC

contentProvider 2016-05-19 fre Macroalgae data provided by the herbarium housed at IRD Noumea. Data are referred to genus and species of sampled specimens along with taxonomical authorship; phylum/class/order/family taxonomy information are also provided. Information on sampling site and event, including country and locality, date, and parameters like geomorphology,depth, visibility,orientation or collector of the specimens and more are recorded. Each specimen is linked to a species file and named with alphanumeric references related to the field notes (location id or collector id followed by the year of the sampling event and the specimen id:e.i. MQ11-001 for the first specimen collected during the Marquesas (MQ) campaign in 2011), an IRD number IRD-xxxx, related to the dried herbarium collection, and possibly a (PC) id referencing specimen deposited in the collections of the Muséum National d'Histoire Naturelle in Paris (MNHN) biota oceans location environment ISO19115 organismes marins vivants biodiversité des récifs coralliens spécimens macroalgues récoltes algues vertes algues brunes algues rouges N/A NC NOUVELLE-CALÉDONIE NEW CALEDONIA VU VANUATU PF POLYNÉSIE FRANCAISE FRENCH POLYNESIA FJ FIDJI FIJI MV MALDIVES PG PAPOUASIE NOUVELLE-GUINEE PAPUA NEW GUINEA SB ILES SALOMON SOLOMON ISLANDS ISO 3166-12 marine organisms living coral reef biodiversity specimens macroalgae sampling green algae brown algae red algae seaweed N/A Occurrence GBIF Dataset Type Vocabulary: http://rs.gbif.org/vocabulary/gbif/dataset_type.xml Specimen GBIF Dataset Subtype Vocabulary: http://rs.gbif.org/vocabulary/gbif/dataset_subtype.xml This work is licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported License. http://creativecommons.org/licenses/by-nc/3.0/ http://lagplon.ird.nc IRD sampling regions in various countries worldwide: Fiji Solomon islands New Caledonia French Polynesia : Marquesas, Gambiers Maldives Vanuatu -180 180 90 -90 1975-07-02 1975-07-02 Chlorophyta enclose a lot of marine and freshwater species typically green due to chlorophyll a and b prevailing in their chloroplats, they also produce starch. They are commonly named "green algae" and are represented in LAGPLON only by marine species belonging to Ulvophyceae and Chlorophyceae. They sizes and forms vary from a few millimeters (Rhipilia) to several decimeters (Caulerpa) and can display blade, filamentous or foliaceous and membranous shape. Some are calcified (Halimeda, Udotea, etc.) and contribute significantly to sediment accumulation. They take a important part in carbon and carbonates cycles. kingdom Plantae Plantes phylum Chlorophyta Green algae Chromophyta are mainly marines and multicellular organisms. In addition to a and c chlorophyll, plastids contain large quantities of carotenoid called fucoxanthin . This pigment gives those algae the brown colour and large algae of Phaeophyceae class are usually called brown algae. They offer a great morphological diversity from simple filamentous forms or in ribbon (Dictyota) to complex forms that sometimes (Sargassum) look like the leaf and stem of terrestrial plants. In the tropical waters, most of the species are Dictyotales and Fucales which form perennial algal beds and affect significantly the underwater landscapes. kingdom Chromista phylum Ochrophyta class Phaeophyceae Brown algae Rhodophyta constitute the group of red algae, they are the most numerous by far and exclusively marines. They contain rhodoplasts where chlorophyll are hidden by supernumerary pigments of phecoerythrin and phycocyanin. Most of those red algae are multicellular and have a wide diversity of forms, filamentous or foliaceous. Some are mucilaginous and delicate or massive and strongly calcareous. The latter are the Corallinaceae and the Sporolithaceae families and are playing a major role in coral reef formation. They also provide fossils from which skeleton can be used for paleoenvironment purposes. kingdom Plantae Plantes phylum Rhodophyta Red algae Created in 1975 by the diving office of the ORSTOM in Noumea (New Caledonia), Lagplon is an information system for marine biodiversity of New Caledonia and other regions of Indo Pacific coral reefs and lagoons. Data collections and marine observations are related to benthic fauna and flora inventories from coastal waters. Lagplon contributes to overseas taxonomic reference update and is supplying national and international portals. In 2013, the database has more than 15.000 specimens referenced of which 8.000 have been identified at the species level and are providing to the INPN (National Inventory of Natural Patrimoine of the National Museum of Natural History of Paris) and then to the GBIF (Global Biodiversity Information Facility) and supported by the IFRECOR initiative and the national strategy for biodiversity. Claude Payri IRD Senior scientist

BP A5 NOUMEA 98848 NC

claude.payri@ird.fr http://coreus.ird.nc Taxonomic identifications are made from histologic sections and with the available specialized literature, references can be found in the world database AlgaeBase. Genetic analyses are based on sequences newly obtained and compared with sequences available in Genbank. Marine flora sampling mainly by SCUBA (0-60m) in various habitats and less frequently by TRIMIX (down to 100 m); collecting effort by reef walking or by snorkeling on fringing reefs and lagoon areas. The data have been collected during several dedicated oceanographic campaigns (mainly on the N/O Alis), as part of doctoral studies or opportunistic sampling during marine research programmes in New Caledonia since the 1980s. Collections are made by hand during the dives. Collected specimens are then sorted in laboratory. Algal specimens are pressed and dried in herbarium sheets as vouchers. Tissue collections are made from fragments removed from the vouchers and preserved in silica gel or ethanol for further DNA analyses and in 5% formalin solution in sea water for histological and anatomical studies. When possible, in situ photographs of the species habit are taken before sampling. Various information (georeferences, taxonomy and photos) are then computed in the Lagplon database. All the taxonomical data have been controled based on morphoanatomic analysis of the specimens and DNA analyses when possible before introduction in the database. Claude Payri principalInvestigator IRD (ex ORSTOM) FRB Ministère de l'écologie, du développement durable et de l'énergie IFRECOR Macroalgae inventory from coastal reef areas of Indo Pacific since the 1980s. Coral reefs and associated ecosystems (mangrove swamp, phanerogam meadow and algae communities) including reefs, lagoons and outer slopes. 2012-02-09T05:14:43.485+11:00 dataset Showe-Mei Lin, John M. Huisman, and Claude Payri (2013) Characterization of Liagora ceranoides (Liagoraceae, Rhodophyta) on the basis of rbcL sequence analyses and carposporophyte development, including Yoshizakia indopacifica gen. et sp. nov. from the Indo-Pacific region. Phycologia: March 2013, Vol. 52, No. 2, pp. 161-170. Nelson W.A., Payri Claude, Sutherland J.E, Dalen J., The genus Melanthalia (Gracilariales, Rhodophyta): new insights from New Caledonia and New Zealand. Phycologia, 2013, sous presse Thomas Sauvage, Claude Payri, Stefano G.A. Draisma, Willem F. Prud'homme van Reine, Heroen Verbruggen, Gareth S. Belton, C. Frederico D. Gurgel, Daniela Gabriel, Alison R. Sherwood, and Suzanne Fredericq (2013) Molecular diversity of the Caulerpa racemosa–Caulerpa peltata complex (Caulerpaceae, Bryopsidales) in New Caledonia, with new Australasian records for C. racemosa var. cylindracea. Phycologia: January 2013, Vol. 52, No. 1, pp. 6-13. Silberfeld T., Bittner L., Fernandez-Garcia C., Cruaud C., Rousseau F., de Reviers B., Leliaert F., Payri Claude, De Clerck O. Species diversity, phylogeny and large scale biogeographic patterns of the genus Padina (Phaeophyceae, Dictyotales). Journal of Phycology, 2013, 49 (1), p. 130-142. ISSN 0022-3646 Dijoux Laury., Verbruggen H., Mattio Lydiane, Duong Nathalie, Payri Claude. Diversity of Halimeda (Bryopsidales, Chlorophyta) in New Caledonia: a combined morphological and molecular study. Journal of Phycology, 2012, 48 (6), p. 1465-1481. ISSN 0022-3646 Showe-Mei Lin, Li-Chia Liu, and Claude Payri (2012) Characterization of Gracilaria vieillardii (Gracilariaceae, Rhodophyta) and molecular phylogeny of foliose species from the western Pacific Ocean, including a description of G. taiwanensis sp. nov.. Phycologia: July 2012, Vol. 51, No. 4, pp. 421-431 Bittner Lucie, Payri Claude, Maneveldt G. W., Couloux A., Cruaud C., de Reviers B., Le Gall L. Evolutionary history of the Corallinales (Corallinophycidae, Rhodophyta) inferred from nuclear, plastidial and mitochonclrial genomes. Molecular Phylogenetics and Evolution, 2011, 61 (3), p. 697-713. ISSN 1055-7903 Mattio Lydiane, Payri Claude. 190 years of Sargassum taxonomy, facing the advent of DNA phylogenies. Botanical Review, 2011, 77 (1), p. 31-70. ISSN 0006-8101 Bittner Lucie., Halary S., Payri Claude, Cruaud C., Reviers de B., Lopez P., Bapteste E. Some considerations for analyzing biodiversity using integrative metagenomics and gene networks. Biology Direct, 2010, 5, p. 47. ISSN 1745-6150 Le Gall L., Payri Claude, Bittner Lucie, Saunders G. W. Multigene phylogenetic analyses support recognition of the Sporolithales ord. nov. Molecular Phylogenetics and Evolution, 2010, 54 (1), p. 302-305. ISSN 1055-7903 Martin Lescanne Julie., Rousseau F., Reviers de B., Payri Claude, Couloux A., Cruaud C., Le Gall L. Phylogenetic analyses of the Laurencia complex (Rhodomelaceae, Ceramiales) support recognition of five genera : Chondrophycus, Laurencia, Osmundea, Palisada and Yuzurua stat. nov. European Journal of Phycology, 2010, 45 (1), p. 51-61. ISSN 0967-0262 Mattio Lydiane, Payri Claude. Assessment of five markers as potential barcodes for identifying Sargassum subgenus Sargassum species (Phaeophyceae, Fucales). Cryptogamie Algologie, 2010, 31 (4), p. 467-485. ISSN 0181-1568 Mattio Lydiane, Payri Claude, Verlaque M., de Reviers B. Taxonomic revision of Sargassum sect. Acanthocarpicae (Fucales, Phaeophyceae). Taxon, 2010, 59 (3), p. 896-904. ISSN 0040-0262 N'Yeurt A. D. R., Payri Claude. Marine algal flora of French Polynesia III. Rhodophyta, with additions to the Phaeophyceae and Chlorophyta. Cryptogamie Algologie, 2010, 31 (1), p. 3-201. ISSN 0181-1568 Mattio Lydiane., Dirberg G., Payri Claude, Andréfouët Serge. Diversity, biomass and distribution pattern of Sargassum beds in the South West lagoon of New Caledonia (South Pacific). Journal of Applied Phycology, 2008, 20 (5), p. 811-823. ISSN 0921-8971 Lagplon UTF-8 online http://lagplon.ird.nc INPN Collection des données de biodiversité marine de Nouvelle-Calédonie UTF-8 HTML http://inpn.mnhn.fr/espece/inventaire/I139 INPN Collection des données de biodiversité marine de Polynésie Française UTF-8 HTML http://inpn.mnhn.fr/espece/inventaire/I140 GBIF LAGPLON - Nouvelle-Calédonie UTF-8 HTML http://www.gbif.org/dataset/e5d47a25-9e51-40db-9b5c-3f766be5c7b5 GBIF LAGPLON - Polynésie francaise UTF-8 HTML http://www.gbif.org/dataset/eed49c61-2085-46c4-8d4f-d2cda50fd404 http://lagplon.ird.nc/img/lagplon-a.gif Collection of marine biodiversity of Indo Pacific - IRD Noumea lagplon_macroalgae Phycological collection of IRD Nouméa (NOU-IRD) driedAndPressed herbarium plates 5000 6000 http://lagplon.ird.nc:8080/ipt/resource.do?id=lagplon_algues/v17.xml